It sounds like a big
fish story: a plan to create a biodiversity map identifying thousands of
aquatic species in every river and stream in the western U.S.
But scientists say they're steadily reeling in that
whopper and by next summer will have the first Aquatic Environmental DNA
Atlas available for the public.
Boise-based U.S. Forest Service fisheries biologist
Dan Isaak is leading the project and says such a map could help with
land management decisions and deciding where to spend limited money and
resources.
"It's kind of the Holy Grail for biologists to know
what a true biodiversity map looks like," he said. "To have that
formatted digitally so you can do lots of science with it will be
transformative in terms of the quality of information we'll have to
conserve species."
Isaak said annual surveys could provide snapshots so
scientists can see how biodiversity and ecosystems change over time.
Because of the project's immense scale, he said, sample collecting
likely will require help from many entities, including citizen
scientists.
The map eventually will include everything from
insects to salmon to river otters. It's possible because of a new
technology that can identify stream inhabitants by analyzing water
samples containing DNA. The technology also can be used to identify
invasive species.
That technology is evolving, said Michael Schwartz,
the Forest Service's director of the National Genomics Center for
Wildlife and Fish Conservation in Missoula, Montana. Currently, he said,
scientists can detect only one species at a time in a stream sample. He
said the goal is to identify multiple species in a single test from one
sample. A rough estimate for when that might be possible is about a
year, he said.
The trove of information has the potential to be so vast that questions not presently imagined might arise.
"Any time science undertakes large projects like this, the payouts can be in directions you don't expect," Schwartz said.
Ultimately, he said, the publicly available
information could be used by someone with an iPad or other device who
could go to a section of river and see what species it contains.
The Aquatic Environmental DNA Atlas for the western
U.S. has its genesis in a smaller-scale project called the Bull Trout
Environmental DNA Atlas involving five states — Idaho, Montana, Nevada,
Oregon and Washington — where the federally protected fish is found.
That effort, Isaak said, has discovered bull trout in areas where they
were thought not to exist.
Isaak also has been working on something called the
Cold Water Climate Shield to identify streams that could serve as a
refuge for cold water species, such as bull trout, if global warming
continues. That map uses millions of temperature recordings going back
decades and has expanded to include most of the western U.S. Stream
temperatures in lower elevations have risen several degrees over the
past 30 years, Isaak said. The DNA Atlas has been confirming the kind of
species present as predicted by the Cold Water Climate Shield, Schwartz
said.
What scientists ultimately hope to do is combine all
the information from stream temperatures, DNA Atlas sampling, topography
and weather patterns to get more insights into species distribution
patterns and even how entire ecosystems function.
"The data sets can be bigger because computers are bigger," Isaak said.
Even for Isaak, who is called a visionary by his
colleagues, the leaps in technology that make his ideas possible can be
mind-boggling.
"It's just been an ongoing revelation," he said,
recalling 15 years ago using pencil and paper to make streamside
observations. "It still seems like magic to me that you can go take a
water sample and you have instruments powerful enough to discern what
species are present."
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